From 2f2e62ccd876bfd4c823a93885ea940924610060 Mon Sep 17 00:00:00 2001
From: Lars von Wolff <lars.von-wolff@ians.uni-stuttgart.de>
Date: Thu, 31 Mar 2022 10:00:35 +0200
Subject: [PATCH] =?UTF-8?q?DD-2f1s=20example=20from=20SFB=20=C3=83=C3=83Po?=
=?UTF-8?q?ster=20(and=20diss)?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
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---
compile_commands.json | 79 +----------------------
dune/phasefield/porenetwork/pn_2pflow.hh | 5 +-
dune/phasefield/porenetwork/pn_initial.hh | 4 +-
src/pntest/pn2p.ini | 2 +-
4 files changed, 8 insertions(+), 82 deletions(-)
diff --git a/compile_commands.json b/compile_commands.json
index ec08815..166946c 100644
--- a/compile_commands.json
+++ b/compile_commands.json
@@ -4,84 +4,9 @@
"command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/dune-phasefield.dir/dune-phasefield.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/dune-phasefield.cc",
"file": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/dune-phasefield.cc"
},
-{
- "directory": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_2f0s",
- "command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/chns_equation.dir/chns_equation.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_2f0s/chns_equation.cc",
- "file": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_2f0s/chns_equation.cc"
-},
-{
- "directory": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_3pchns_r",
- "command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/3p_equation.dir/3p_equation.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_3pchns_r/3p_equation.cc",
- "file": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_3pchns_r/3p_equation.cc"
-},
-{
- "directory": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_2pchns_r",
- "command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/2p_equation.dir/2p_equation.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_2pchns_r/2p_equation.cc",
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-},
-{
- "directory": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_contactpointdynamics",
- "command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/cp_equation.dir/cp_equation.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_contactpointdynamics/cp_equation.cc",
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-},
-{
- "directory": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/summerschool",
- "command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/summerschool.dir/summerschool.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/summerschool/summerschool.cc",
- "file": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/summerschool/summerschool.cc"
-},
-{
- "directory": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_slipvelocity",
- "command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/s_equation.dir/s_equation.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_slipvelocity/s_equation.cc",
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-},
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- "directory": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/test_hainesjump",
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-},
-{
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-},
-{
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-},
-{
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- "file": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/example_cahnhilliard/ch3p_equation.cc"
-},
-{
- "directory": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/example_cahnhilliard",
- "command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/ch2p_equation.dir/ch2p_equation.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/example_cahnhilliard/ch2p_equation.cc",
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-},
-{
- "directory": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/example_nucleus",
- "command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/nucleus_equation.dir/nucleus_equation.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/example_nucleus/nucleus_equation.cc",
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-},
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- "directory": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/paper_thinstrip_full",
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-},
-{
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- "command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/pntest.dir/pntest.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/pntest/pntest.cc",
- "file": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/pntest/pntest.cc"
+ "command": "/usr/bin/g++ -DENABLE_EIGEN=1 -DENABLE_GMP=1 -DENABLE_MPI=1 -DENABLE_QUADMATH=1 -DENABLE_SUITESPARSE=1 -DENABLE_SUPERLU=1 -DENABLE_TBB=1 -DENABLE_UG=1 -DHAVE_CONFIG_H -DMPICH_SKIP_MPICXX -DMPIPP_H -DMPI_NO_CPPBIND -DModelP -DUG_USE_NEW_DIMENSION_DEFINES -D_GLIBCXX_USE_FLOAT128=1 -D_TBB_CPP0X -I/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield -I/usr/local/ssd/home/vonwolls/dumux/dune-phasefield -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-common -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-geometry -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-uggrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/low -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/gm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/dom -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/ui -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/algebra -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/np/udm -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ppif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/dddif -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/util -I/home/ians1/vonwolls/ssd_local/dumux/dune-uggrid/parallel/ddd/include -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-typetree -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-istl -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-grid -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-localfunctions -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-functions -I/usr/include/python3.5m -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-python -isystem /home/ians1/vonwolls/ssd_local/dumux/dune-alugrid -I/home/ians1/vonwolls/ssd_local/dumux/dune-pdelab -isystem /usr/include/eigen3 -isystem /usr/include/suitesparse -isystem /usr/include/superlu -std=c++17 -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -fdiagnostics-color=always -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-reorder -Wno-sign-compare -fPIE -fext-numeric-literals -o CMakeFiles/pn2ptest.dir/pn2ptest.cc.o -c /home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/pntest/pn2ptest.cc",
+ "file": "/home/ians1/vonwolls/ssd_local/dumux/dune-phasefield/src/pntest/pn2ptest.cc"
}
]
\ No newline at end of file
diff --git a/dune/phasefield/porenetwork/pn_2pflow.hh b/dune/phasefield/porenetwork/pn_2pflow.hh
index c1dfca8..6c06ecd 100644
--- a/dune/phasefield/porenetwork/pn_2pflow.hh
+++ b/dune/phasefield/porenetwork/pn_2pflow.hh
@@ -372,7 +372,7 @@ private:
return Dune::FieldVector<double,1>((phi1+phi2)*std::sqrt(v[0]*v[0]+v[1]*v[1]));
});
Dune::PDELab::integrateGridFunction(productFunction,integral,2);
- //writeVTK(iter+1);
+ writeVTK(iter+1);
}
while ((integral[0]>param.PCS_Search_VelThreshold)
&& (iter < param.PCS_Search_MaxCHNSIter));
@@ -438,7 +438,8 @@ public:
vtkwriter = std::make_unique<Dune::VTKSequenceWriter<GV> >(stationaryvtkwriter,OutputFilename.c_str(),OutputFilename.c_str(),"");
dgf->addToVTKWriter(*vtkwriter);
-
+ writeVTK(-1);
+
initializeGridOperators();
findStationaryState();
diff --git a/dune/phasefield/porenetwork/pn_initial.hh b/dune/phasefield/porenetwork/pn_initial.hh
index be66d9e..1e7c484 100644
--- a/dune/phasefield/porenetwork/pn_initial.hh
+++ b/dune/phasefield/porenetwork/pn_initial.hh
@@ -93,8 +93,8 @@ public:
std::cout << "WARNING: pn_initial.hh cannot find shape" << myshape << std::endl;
}
- RF Cornerflow = param.tw.dw.eval_shape((x[0]+x[1]-4*r)*1/eps);
-
+ //RF Cornerflow = param.tw.dw.eval_shape((x[0]+x[1]-4*r)*1/eps);
+ RF Cornerflow = param.tw.dw.eval_shape((sqrt((x[0]-r)*(x[0]-r)+(x[1]-r)*(x[1]-r))-2*r)*1/eps);
if(Phase == 0)
{
y = Pore*(1-Cornerflow);
diff --git a/src/pntest/pn2p.ini b/src/pntest/pn2p.ini
index ae77650..73e3edf 100644
--- a/src/pntest/pn2p.ini
+++ b/src/pntest/pn2p.ini
@@ -24,7 +24,7 @@ MaxCHNSIter = 100
filename = grids/square_periodic.msh
[output]
-filename = outp_kf_testing
+filename = outp_poster
[Phasefield]
eps=0.02
--
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